基于网络药理学及分子对接研究柚皮素抗胃癌机制

吴静洁, 梅应兵, 姚雪婷, 等. 基于网络药理学及分子对接研究柚皮素抗胃癌机制[J]. 中国中西医结合消化杂志, 2021, 29(2): 124-131. doi: 10.3969/j.issn.1671-038X.2021.02.09
引用本文: 吴静洁, 梅应兵, 姚雪婷, 等. 基于网络药理学及分子对接研究柚皮素抗胃癌机制[J]. 中国中西医结合消化杂志, 2021, 29(2): 124-131. doi: 10.3969/j.issn.1671-038X.2021.02.09
WU Jingjie, MEI Yingbing, YAO Xueting, et al. Mechanism of naringenin against gastric cancer based on biomolecular network and molecular docking[J]. Chin J Integr Tradit West Med Dig, 2021, 29(2): 124-131. doi: 10.3969/j.issn.1671-038X.2021.02.09
Citation: WU Jingjie, MEI Yingbing, YAO Xueting, et al. Mechanism of naringenin against gastric cancer based on biomolecular network and molecular docking[J]. Chin J Integr Tradit West Med Dig, 2021, 29(2): 124-131. doi: 10.3969/j.issn.1671-038X.2021.02.09

基于网络药理学及分子对接研究柚皮素抗胃癌机制

  • 基金项目:

    国家中医药管理局全国名老中医(甘爱萍)传承工作室建设项目(No:国中医药人教发2016-42)

详细信息
    通讯作者: 梅应兵,E-mail:myb114@163.com
  • 中图分类号: R735.2

Mechanism of naringenin against gastric cancer based on biomolecular network and molecular docking

More Information
  • 目的:柚皮素是一种广泛存在于多种中药中的黄酮类化合物,具有优秀的抗炎、抗氧化以及抗癌功能,该研究系统探讨柚皮素抗胃癌的可能作用机制。方法:通过检索TCMSP、CTD、GeneCard、OMIM、DisGeNET及STRING数据平台获得相关数据,筛选后制成“成分-靶点”网络及蛋白互作网络,利用R软件运行bioconductor平台的数据包将相关靶点进行GO和KEGG的富集分析,并应用Schroedinger软件进行分子对接,以分析柚皮素与治疗靶点的作用力及结合自由能。结果:柚皮素治疗胃癌涉及61个靶点,包括TP53、AKT1、Casp3、ALB、MAPK3、EGFR、ESR1等,其中TP53、Casp3对接分数优于原配体。柚皮素可以调控Apoptosis、p53、NF-kB、PI3K-AKT等信号通路可阻滞细胞周期、诱发细胞程序性死亡,能抗肿瘤和抑制新生血管形成。结论:柚皮素治疗胃癌是多靶点、多通路作用结果,具有一定的研究和开发前景。
  • 加载中
  • [1]

    Bray F,Ferlay J,Soerjomataram I,et al.Global cancer statistics 2018:GLOBOCAN estimates of incidence and mortality worldwide for 36 cancers in 185 countries[J].CA Cancer J Clin,2018,68(6):394-424.

    [2]

    郑荣寿,孙可欣,张思维,等.2015年中国恶性肿瘤流行情况分析[J].中华肿瘤杂志,2019,41(1):19-28.

    [3]

    Song Z,Wu Y,Yang J,et al.Progress in the treatment of advanced gastric cancer[J].Tumour Biol,2017,39(7):1010428317714626.

    [4]

    李国立,相小松.晚期胃癌综合治疗国内外指南解析[J].中国实用外科杂志,2017,37(10):1128-1131.

    [5]

    Joshi R,Kulkarni YA,Wairkar S.Pharmacokinetic,pharmacodynamic and formulations aspects of Naringenin:An update[J].Life Sci,2018,215:43-56.

    [6]

    Casey SC,Amedei A,Aquilano K,et al.Cancer prevention and therapy through the modulation of the tumor microenvironment[J].Semin Cancer Biol,2015,35(Suppl):S199-S223.

    [7]

    Zhang H,Zhong X,Zhang X,et al.Enhanced anticancer effect of ABT-737 in combination with naringenin on gastric cancer cells[J].Exp Ther Med,2016,11(2):669-673.

    [8]

    叶群立,张洋洋,罗金健.柚皮素联合Bcl-2抑制剂ABT-263调控信号通路AKT对胃癌细胞增殖凋亡的影响[J].中国老年学杂志,2019,39(8):1948-1951.

    [9]

    Pei T,Zheng C,Huang C,et al.Systematic understanding the mechanisms of vitiligo pathogenesis and its treatment by Qubaibabuqi formula[J].J Ethnopharmacol,2016,190:272-287.

    [10]

    王玉涛,庞雪,李安举.小檗碱干预下肢动脉硬化闭塞症的网络药理学研究[J].现代中西医结合杂志,2020,29(25):2793-2796,2823.

    [11]

    Yu G,Wang LG,Han Y,et al.clusterProfiler:an R package for comparing biological themes among gene clusters[J].OMICS,2012,16(5):284-287.

    [12]

    Kollman PA,Massova I,Reyes C,et al.Calculating structures and free energies of complex molecules:combining molecular mechanics and continuum models[J].Acc Chem Res,2000,33(12):889-897.

    [13]

    曾佑炜.黄酮抗癌作用研究进展[J].天然产物研究与开发,2016,28(11):1838-1844.

    [14]

    季鹏,赵文明,于桐.柚皮素的最新研究进展[J].中国新药杂志,2015,24(12):1382-1386,1392.

    [15]

    Ekambaram G,Rajendran P,Magesh V,et al.Naringenin reduces tumor size and weight lost in N-methyl-N'-nitro-N-nitrosoguanidine-induced gastric carcinogenesis in rats[J].Nutr Res,2008,28(2):106-112.

    [16]

    Kanno S,Tomizawa A,Hiura T,et al.Inhibitory effects of naringenin on tumor growth in human cancer cell lines and sarcoma S-180-implanted mice[J].Biol Pharm Bull,2005,28(3):527-530.

    [17]

    Bao L,Liu F,Guo HB,et al.Naringenin inhibits proliferation,migration,and invasion as well as induces apoptosis of gastric cancer SGC7901 cell line by downregulation of AKT pathway[J].Tumour Biol,2016,37(8):11365-11374.

    [18]

    Olivier M,Hollstein M,Hainaut P.TP53 mutations in human cancers:origins,consequences,and clinical use[J].Cold Spring Harb Perspect Biol,2010,2(1):a001008.

    [19]

    Park HJ,Choi YJ,Lee JH,et al.Naringenin causes ASK1-induced apoptosis via reactive oxygen species in human pancreatic cancer cells[J].Food Chem Toxicol,2017,99:1-8.

    [20]

    Ge H,Yan Y,Tian F,et al.Prognostic value of estrogen receptor α and estrogen receptor β in gastric cancer based on a meta-analysis and The Cancer Genome Atlas(TCGA)datasets[J].Int J Surg,2018,53:24-31.

    [21]

    Xu Z,Huang B,Liu J,et al.Combinatorial anti-proliferative effects of tamoxifen and naringenin:The role of four estrogen receptor subtypes[J].Toxicology,2018,410:231-246.

    [22]

    Hoxhaj G,Manning BD.The PI3K-AKT network at the interface of oncogenic signalling and cancer metabolism[J].Nat Rev Cancer,2020,20(2):74-88.

    [23]

    Ding S,Qiu H,Huang J,et al.Activation of 20-HETE/PPARs involved in reno-therapeutic effect of naringenin on diabetic nephropathy[J].Chem Biol Interact,2019,307:116-124.

    [24]

    石琬岚,黄娟,李映莹,等.柚皮素对糖尿病肝损伤小鼠的保护作用[J].中国新药与临床杂志,2019,38(7):427-432.

    [25]

    Kapoor R,Rizvi F,Kakkar P.Naringenin prevents high glucose-induced mitochondria-mediated apoptosis involving AIF,Endo-G and caspases[J].Apoptosis,2013,18(1):9-27.

    [26]

    de Oliveira MR,Custódio de Souza IC,Fürstenau CR.Promotion of mitochondrial protection by naringenin in methylglyoxal-treated SH-SY5Y cells:Involvement of the Nrf2/GSH axis[J].Chem Biol Interact,2019,310:108728.

    [27]

    Bulzomi P,Bolli A,Galluzzo P,et al.The naringenin-induced proapoptotic effect in breast cancer cell lines holds out against a high bisphenol a background[J].IUBMB Life,2012,64(8):690-696.

    [28]

    暴雷.柚皮素对人胃癌SGC7901细胞的影响及其相关机制研究[D].石家庄:河北医科大学,2016.

    [29]

    Vandergaast R,Mitchell JK,Byers NM,et al.Insect inhibitor-of-apoptosis(IAP)proteins are negatively regulated by signal-induced N-terminal degrons absent within viral IAP proteins[J].J Virol,2015,89(8):4481-4493.

    [30]

    Savitskaya MA,Onishchenko GE.Mechanisms of Apoptosis[J].Biochemistry(Mosc),2015,80(11):1393-1405.

    [31]

    Hong B,Van den Heuvel AP,Prabhu VV,et al.Targeting tumor suppressor p53 for cancer therapy:strategies,challenges and opportunities[J].Curr Drug Targets,2014,15(1):80-89.

    [32]

    陈美琴,吴光杰,李玉萍.天然多糖调控p53基因表达的研究进展[J].天然产物研究与开发,2015,27(9):1687-1691.

    [33]

    Johnson RF,Perkins ND.Nuclear factor-κB,p53,and mitochondria:regulation of cellular metabolism and the Warburg effect[J].Trends Biochem Sci,2012,37(8):317-324.

    [34]

    Ben-Neriah Y,Karin M.Inflammation meets cancer,with NF-κB as the matchmaker[J].Nat Immunol,2011,12(8):715-723.

    [35]

    郭威,张冲.PI3K/AKT信号传导通路在恶性肿瘤中的研究进展[J].河北医科大学学报,2018,39(6):734-738.

    [36]

    Yothaisong S,Dokduang H,Techasen A,et al.Increased activation of PI3K/AKT signaling pathway is associated with cholangiocarcinoma metastasis and PI3K/mTOR inhibition presents a possible therapeutic strategy[J].Tumor Biology,2013,34(6):3637-3648.

  • 加载中
计量
  • 文章访问数:  497
  • PDF下载数:  63
  • 施引文献:  0
出版历程
收稿日期:  2020-06-06

目录